This article describes the construction and application of a complex spiritually integrated psychotherapeutic model for assessment and treatment of internalized homophobia. Homophobia is a complex phenomenon because it includes multiple dimensions: personal, interpersonal, institutional, cultural, political, social, and historical. Internalized homophobia is a mental health problem that affects the subjectivity of 2SLGBTQ+ people. The model explained in this article is a product of the integration of principles from psychoanalytic psychotherapy, 2SLGBTQ+ affirmative framework, narrative therapy, and spiritually integrated psychotherapy. The integration is facilitated by the principles of complex thinking. This article emphasizes the problem of internalized homophobia and the coming out process from a spiritual perspective.